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SRX1947623: RNA-Seq of Goat: Pituitary
1 ILLUMINA (NextSeq 500) run: 17.5M spots, 4.9G bases, 2.2Gb downloads

Design: TruSeq RNA Sample Prep v2 standard protocol
Submitted by: USDA-ARS
Study: Capra hircus breed:San Clemente Genome sequencing and assembly
show Abstracthide Abstract
This is a de novo assembly of the domestic goat (Capra hircus) exclusively using long reads. The assembly was scaffolded using a combination of optical map data, and Hi-C contact alignment graphs. Subsequent scaffolding was confirmed using a Radiation Hybrid map for the goat. This study was a proof of principle that a combination of cutting edge sequencing technologies can be used to efficiently create accurate chromosome-scale scaffolds.
Sample: SC02-pituitary
SAMN05389751 • SRS1563162 • All experiments • All runs
Organism: Capra hircus
Library:
Name: SC02-pituitary-L1
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 17.5M spots, 4.9G bases, 2.2Gb
Run# of Spots# of BasesSizePublished
SRR391797517,450,9534.9G2.2Gb2016-07-18

ID:
2804657

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